Sequence Similarity Clusters for the Entities in PDB 1M9E

Entity #1 | Chains: A,B
Cyclophilin A protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 43 95 114
95 % 51 109 144
90 % 51 110 154
70 % 86 167 131
50 % 97 205 111
40 % 102 221 125
30 % 104 231 135
Entity #2 | Chains: C,D
HIV-1 Capsid protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40561
95 % 7 27 715
90 % 8 28 712
70 % 8 28 754
50 % 10 32 702
40 % 10 32 743
30 % 11 35 700

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.