Sequence Similarity Clusters for the Entities in PDB 1M9D

Entity #1 | Chains: A,B
Cyclophilin A protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 72 112 112
95 % 80 126 142
90 % 80 127 151
70 % 123 184 128
50 % 141 223 108
40 % 147 241 126
30 % 151 251 131
Entity #2 | Chains: C,D
HIV-1 Capsid protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43662
95 % 13 45 211
90 % 14 46 219
70 % 14 46 248
50 % 16 50 257
40 % 16 50 272
30 % 18 53 274

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.