Sequence Similarity Clusters for the Entities in PDB 1M93

Entity #1 | Chains: A
Serine proteinase inhibitor 2 protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75295
95 % 1 1 52218
90 % 1 1 49488
70 % 1 1 43357
50 % 1 1 36951
40 % 1 1 32516
30 % 1 1 27459
Entity #2 | Chains: B
Serine proteinase inhibitor 2 protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60455
95 % 1 1 42676
90 % 1 1 40711
70 % 1 1 36031
50 % 1 1 30697
40 % 1 1 27072
30 % 1 1 22949
Entity #3 | Chains: C
Serine proteinase inhibitor 2 protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 50672
95 % 1 2 37840 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 2 36097
70 % 1 2 32064
50 % 1 2 27391
40 % 1 2 24203
30 % 1 2 20566

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures