Sequence Similarity Clusters for the Entities in PDB 1M93

Entity #1 | Chains: A
Serine proteinase inhibitor 2 protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73990
95 % 1 1 51368
90 % 1 1 48718
70 % 1 1 42704
50 % 1 1 36416
40 % 1 1 32045
30 % 1 1 27073
Entity #2 | Chains: B
Serine proteinase inhibitor 2 protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59346
95 % 1 1 41939
90 % 1 1 40037
70 % 1 1 35460
50 % 1 1 30235
40 % 1 1 26666
30 % 1 1 22620
Entity #3 | Chains: C
Serine proteinase inhibitor 2 protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 49750
95 % 1 2 37192 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 2 35508
70 % 1 2 31558
50 % 1 2 26992
40 % 1 2 23846
30 % 1 2 20273

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures