Sequence Similarity Clusters for the Entities in PDB 1M8V

Entity #1 | Chains: O,P,Q,R,S,T,U
5'-R(P*UP*UP*UP*UP*UP*UP*U)-3' rna, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N
PUTATIVE SNRNP SM-LIKE PROTEIN protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 843
95 % 2 2 1153
90 % 2 2 1174
70 % 2 2 1214
50 % 4 5 470
40 % 4 6 444
30 % 6 11 381

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.