Sequence Similarity Clusters for the Entities in PDB 1M8T

Entity #1 | Chains: A,B,C,D,E,F
Phospholipase a2 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 14115
95 % 1 1 13389 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 1 13170
70 % 1 1 12388
50 % 63 122 316
40 % 167 307 100
30 % 167 307 112

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures