Sequence Similarity Clusters for the Entities in PDB 1M8O

Entity #1 | Chains: A
platelet integrin alfaIIb subunit: cytoplasmic domain protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 24628
95 % 3 4 21033
90 % 3 5 14799
70 % 3 5 13900
50 % 3 5 12338
40 % 3 5 11188
30 % 3 5 9725
Entity #2 | Chains: B
platelet integrin beta3 subunit: cytoplasmic domain protein, length: 47 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72876
95 % 2 2 36352
90 % 2 2 34723
70 % 2 2 30907
50 % 2 2 26435
40 % 2 2 23355
30 % 2 2 19844

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.