Sequence Similarity Clusters for the Entities in PDB 1M8O

Entity #1 | Chains: A
platelet integrin alfaIIb subunit: cytoplasmic domain protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 22715
95 % 3 4 19398
90 % 3 5 13609
70 % 3 5 12800
50 % 3 5 11450
40 % 3 5 10401
30 % 3 5 9044
Entity #2 | Chains: B
platelet integrin beta3 subunit: cytoplasmic domain protein, length: 47 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67922
95 % 2 2 33625
90 % 2 2 32184
70 % 2 2 28792
50 % 2 2 24727
40 % 2 2 21854
30 % 2 2 18544

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.