Sequence Similarity Clusters for the Entities in PDB 1M8O

Entity #1 | Chains: A
platelet integrin alfaIIb subunit: cytoplasmic domain protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 23850
95 % 3 4 20356
90 % 3 5 14330
70 % 3 5 13446
50 % 3 5 11975
40 % 3 5 10854
30 % 3 5 9418
Entity #2 | Chains: B
platelet integrin beta3 subunit: cytoplasmic domain protein, length: 47 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70873
95 % 2 2 35355
90 % 2 2 33804
70 % 2 2 30146
50 % 2 2 25833
40 % 2 2 22828
30 % 2 2 19381

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.