Sequence Similarity Clusters for the Entities in PDB 1M8O

Entity #1 | Chains: A
platelet integrin alfaIIb subunit: cytoplasmic domain protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 24238
95 % 3 4 20675
90 % 3 5 14565
70 % 3 5 13659
50 % 3 5 12142
40 % 3 5 11010
30 % 3 5 9564
Entity #2 | Chains: B
platelet integrin beta3 subunit: cytoplasmic domain protein, length: 47 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71811
95 % 2 2 35897
90 % 2 2 34307
70 % 2 2 30597
50 % 2 2 26205
40 % 2 2 23151
30 % 2 2 19662

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.