Sequence Similarity Clusters for the Entities in PDB 1M8N

Entity #1 | Chains: A,B,C,D
Antifreeze protein isoform 501 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16922
95 % 1 2 15705 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 2 15375
70 % 1 2 14385
50 % 2 5 6133
40 % 2 5 5694
30 % 2 5 5012

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures