Sequence Similarity Clusters for the Entities in PDB 1M8N

Entity #1 | Chains: A,B,C,D
Antifreeze protein isoform 501 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15465
95 % 1 2 14504 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 2 14233
70 % 1 2 13333
50 % 1 2 11857
40 % 1 2 10752
30 % 1 2 9326

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.