Sequence Similarity Clusters for the Entities in PDB 1M8M

Entity #1 | Chains: A
SPECTRIN ALPHA CHAIN, BRAIN protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 25 2156
95 % 30 31 1895
90 % 38 39 1453
70 % 42 43 1244
50 % 42 43 1304
40 % 274 313 113
30 % 349 398 74

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures