Sequence Similarity Clusters for the Entities in PDB 1M8L

Entity #1 | Chains: A
VPR Protein protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 47596
95 % 1 2 35543
90 % 1 2 33940
70 % 2 3 18409
50 % 2 3 15977
40 % 2 3 14240
30 % 2 3 12191

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures