Sequence Similarity Clusters for the Entities in PDB 1M8L

Entity #1 | Chains: A
VPR Protein protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 48915
95 % 1 2 36459
90 % 1 2 34789
70 % 2 3 18917
50 % 2 3 16399
40 % 2 3 14601
30 % 2 3 12494

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures