Sequence Similarity Clusters for the Entities in PDB 1M7I

Entity #1 | Chains: A
light chain of the monoclonal antibody Fab SYA/J6 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 21357
95 % 107 146 147 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 115 156 148
70 % 1309 2362 1
50 % 2670 4781 1
40 % 2670 4781 1
30 % 3060 5635 1
Entity #2 | Chains: B
heavy chain of the monoclonal antibody Fab SYA/J6 protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 27723
95 % 3 4 18447 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 3 4 18040
70 % 1293 2311 2
50 % 2671 4781 1
40 % 2671 4781 1
30 % 3061 5635 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures