Sequence Similarity Clusters for the Entities in PDB 1M7I

Entity #1 | Chains: A
light chain of the monoclonal antibody Fab SYA/J6 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 19827
95 % 104 147 153 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 115 162 146
70 % 1393 2516 1
50 % 2846 5101 1
40 % 3247 5750 1
30 % 3986 7168 1
Entity #2 | Chains: B
heavy chain of the monoclonal antibody Fab SYA/J6 protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 26374
95 % 3 4 17997 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 3 4 17551
70 % 1381 2475 2
50 % 2847 5101 1
40 % 3248 5750 1
30 % 3987 7168 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures