Sequence Similarity Clusters for the Entities in PDB 1M72

Entity #1 | Chains: A,B,C
Caspase-1 protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 26871
95 % 1 1 22517 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 21866
70 % 1 1 20057
50 % 1 2 8843
40 % 65 100 246
30 % 69 112 220
Entity #2 | Chains: D,E,F
Ace-Asp-Glu-Val-Asp-chloromethylketone protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.