Sequence Similarity Clusters for the Entities in PDB 1M6O

Entity #1 | Chains: A
HLA class I histocompatibility antigen, BW-44(B-12) B*4402 alpha chain protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 9 6726
95 % 3 22 2189
90 % 40 189 144
70 % 86 664 7
50 % 86 669 7
40 % 88 717 10
30 % 91 834 15
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 83 579 2
95 % 95 622 3
90 % 95 631 4
70 % 103 859 5
50 % 105 879 5
40 % 105 879 9
30 % 105 879 14
Entity #3 | Chains: C
HLA DPA*0201 peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.