Sequence Similarity Clusters for the Entities in PDB 1M6I

Entity #1 | Chains: A
Programmed cell death protein 8 protein, length: 493 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 10183
95 % 9 17 1791 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.4
PDBFlex
90 % 9 17 1829
70 % 9 17 1853
50 % 9 17 1887
40 % 9 17 1888
30 % 9 17 1821

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures