Sequence Similarity Clusters for the Entities in PDB 1M6D

Entity #1 | Chains: A,B
Cathepsin F protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41069
95 % 1 1 31328 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 1 30039
70 % 1 1 26857
50 % 1 1 22920
40 % 70 212 137
30 % 74 248 125

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures