Sequence Similarity Clusters for the Entities in PDB 1M6D

Entity #1 | Chains: A,B
Cathepsin F protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40561
95 % 1 1 30948 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 1 29683
70 % 1 1 26578
50 % 1 1 22683
40 % 70 212 133
30 % 74 248 126

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.