Sequence Similarity Clusters for the Entities in PDB 1M63

Entity #1 | Chains: A,E
SERINE/THREONINE PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT, ALPHA ISOFORM protein, length: 372 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 6354
95 % 6 9 5243 Flexibility: Low
Max RMSD: 7.3, Avg RMSD: 2.0
PDBFlex
90 % 6 9 5269
70 % 7 10 4766
50 % 7 10 4555
40 % 7 10 4322
30 % 63 74 446
Entity #2 | Chains: B,F
CALCINEURIN B SUBUNIT ISOFORM 1 protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 12 3830
95 % 11 12 4638 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 11 12 4668
70 % 11 12 4581
50 % 12 13 4135
40 % 12 13 3944
30 % 209 385 50
Entity #3 | Chains: C,G
PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 101 112 139
95 % 117 128 149 Flexibility: No
Max RMSD: 2.2, Avg RMSD: 0.5
PDBFlex
90 % 118 129 159
70 % 174 186 140
50 % 212 225 120
40 % 225 243 137
30 % 232 253 136
Entity #4 | Chains: D,H
CYCLOSPORIN A protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures