Sequence Similarity Clusters for the Entities in PDB 1M63

Entity #1 | Chains: A,E
SERINE/THREONINE PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT, ALPHA ISOFORM protein, length: 372 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 6128
95 % 6 9 5061 Flexibility: Low
Max RMSD: 7.3, Avg RMSD: 2.0
PDBFlex
90 % 6 9 5083
70 % 7 10 4600
50 % 7 10 4414
40 % 7 10 4206
30 % 62 72 451
Entity #2 | Chains: B,F
CALCINEURIN B SUBUNIT ISOFORM 1 protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 12 3690
95 % 11 12 4481 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 11 12 4507
70 % 11 12 4429
50 % 12 13 4005
40 % 12 13 3833
30 % 199 368 53
Entity #3 | Chains: C,G
PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 101 112 116
95 % 115 126 146 Flexibility: No
Max RMSD: 2.2, Avg RMSD: 0.5
PDBFlex
90 % 116 127 156
70 % 172 184 131
50 % 210 223 113
40 % 223 241 130
30 % 230 251 132
Entity #4 | Chains: D,H
CYCLOSPORIN A protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.