Sequence Similarity Clusters for the Entities in PDB 1M63

Entity #1 | Chains: A,E
SERINE/THREONINE PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT, ALPHA ISOFORM protein, length: 372 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 6238
95 % 6 9 5156 Flexibility: Low
Max RMSD: 7.3, Avg RMSD: 2.0
PDBFlex
90 % 6 9 5175
70 % 7 10 4680
50 % 7 10 4483
40 % 7 10 4265
30 % 63 74 441
Entity #2 | Chains: B,F
CALCINEURIN B SUBUNIT ISOFORM 1 protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 12 3761
95 % 11 12 4563 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 11 12 4583
70 % 11 12 4502
50 % 12 13 4069
40 % 12 13 3892
30 % 201 374 53
Entity #3 | Chains: C,G
PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 101 112 120
95 % 115 126 148 Flexibility: No
Max RMSD: 2.2, Avg RMSD: 0.5
PDBFlex
90 % 116 127 158
70 % 172 184 139
50 % 210 223 117
40 % 223 241 135
30 % 230 251 135
Entity #4 | Chains: D,H
CYCLOSPORIN A protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures