Sequence Similarity Clusters for the Entities in PDB 1M5S

Entity #1 | Chains: A,B,C,D
Formylmethanofuran--tetrahydromethanopterin formyltransferase protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19956
95 % 1 1 17646 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 17293
70 % 1 1 16072
50 % 2 6 2580
40 % 2 6 2540
30 % 2 6 2414

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures