Sequence Similarity Clusters for the Entities in PDB 1M5Q

Entity #1 | Chains: 1,2,A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z
small nuclear ribonucleoprotein homolog protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 1642
95 % 1 1 2174 Flexibility: Medium
Max RMSD: 10.3, Avg RMSD: 5.4
PDBFlex
90 % 1 1 2225
70 % 1 1 2225
50 % 1 1 2213
40 % 1 1 2203
30 % 1 1 2103

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures