Sequence Similarity Clusters for the Entities in PDB 1M5N

Entity #1 | Chains: S
Importin beta-1 subunit protein, length: 485 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 25400
95 % 6 6 5380 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.6
PDBFlex
90 % 6 6 5400
70 % 6 6 5327
50 % 6 6 5067
40 % 6 6 4791
30 % 6 6 4371
Entity #2 | Chains: Q
Parathyroid hormone-related protein protein, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74652
95 % 1 1 52100
90 % 1 1 49428
70 % 1 1 43262
50 % 1 1 36908
40 % 1 1 32552
30 % 1 1 27621

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.