Sequence Similarity Clusters for the Entities in PDB 1M5F

Entity #1 | Chains: A,B,C
Glutamate receptor 2 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 66 119 95
95 % 95 161 61 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.1
PDBFlex
90 % 108 184 61
70 % 108 184 74
50 % 166 278 37
40 % 166 279 50
30 % 204 360 49

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures