Sequence Similarity Clusters for the Entities in PDB 1M5E

Entity #1 | Chains: A,B,C
Glutamate receptor 2 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 73 108
95 % 19 156 61 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.1
PDBFlex
90 % 20 179 61
70 % 20 179 70
50 % 38 271 33
40 % 38 272 44
30 % 46 288 53

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.