Sequence Similarity Clusters for the Entities in PDB 1M5D

Entity #1 | Chains: A
Glutamate receptor 2 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 10268
95 % 40 157 61 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.1
PDBFlex
90 % 41 180 61
70 % 41 180 71
50 % 75 272 35
40 % 75 273 47
30 % 86 289 54

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.