Sequence Similarity Clusters for the Entities in PDB 1M5B

Entity #1 | Chains: A,B,C
Glutamate receptor 2 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 33 74 113
95 % 76 161 62 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.1
PDBFlex
90 % 85 184 60
70 % 85 184 70
50 % 131 278 37
40 % 131 279 49
30 % 145 295 60

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures