Sequence Similarity Clusters for the Entities in PDB 1M57

Entity #1 | Chains: A,G
CYTOCHROME C OXIDASE protein, length: 566 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 29690
95 % 10 10 2848
90 % 10 10 2894
70 % 14 14 2310
50 % 45 51 533
40 % 45 51 573
30 % 45 51 566
Entity #2 | Chains: B,H
CYTOCHROME C OXIDASE protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 10 2315
95 % 10 10 2947
90 % 10 10 2995
70 % 10 10 2982
50 % 11 11 2759
40 % 11 11 2732
30 % 42 48 593
Entity #3 | Chains: C,I
CYTOCHROME C OXIDASE protein, length: 266 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 18839
95 % 2 2 16643
90 % 2 2 16315
70 % 2 2 15195
50 % 3 3 11083
40 % 34 40 740
30 % 34 40 733
Entity #4 | Chains: D,J
CYTOCHROME C OXIDASE protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 23210
95 % 2 2 19804
90 % 2 2 19268
70 % 2 2 17775
50 % 2 2 15511
40 % 2 2 13851
30 % 2 2 11873

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.