Sequence Similarity Clusters for the Entities in PDB 1M4U

Entity #1 | Chains: L
Bone Morphogenetic Protein-7 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 19530
95 % 2 4 17784 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.3
PDBFlex
90 % 2 4 17346
70 % 2 6 8552
50 % 2 6 7816
40 % 2 6 7170
30 % 2 6 6252
Entity #2 | Chains: A
Noggin protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52531
95 % 1 1 43285
90 % 1 1 41189
70 % 1 1 36374
50 % 1 1 30869
40 % 1 1 27059
30 % 1 1 22583

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures