Sequence Similarity Clusters for the Entities in PDB 1M4U

Entity #1 | Chains: L
Bone Morphogenetic Protein-7 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 22400
95 % 2 4 19250 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.4
PDBFlex
90 % 2 4 18729
70 % 2 6 8914
50 % 2 6 8061
40 % 2 6 7394
30 % 2 6 6526
Entity #2 | Chains: A
Noggin protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59974
95 % 1 1 41860
90 % 1 1 39813
70 % 1 1 35150
50 % 1 1 29993
40 % 1 1 26455
30 % 1 1 22420

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.