Sequence Similarity Clusters for the Entities in PDB 1M4H

Entity #1 | Chains: A,B
beta-Secretase protein, length: 391 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 178 278 21
95 % 239 361 15 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.9
PDBFlex
90 % 239 361 16
70 % 239 361 24
50 % 245 373 40
40 % 245 373 51
30 % 245 373 70
Entity #2 | Chains: C,D
Inhibitor OM00-3 protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures