Sequence Similarity Clusters for the Entities in PDB 1M4H

Entity #1 | Chains: A,B
beta-Secretase protein, length: 391 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 177 276 25
95 % 240 364 15 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.9
PDBFlex
90 % 240 364 16
70 % 240 364 24
50 % 246 376 41
40 % 246 376 56
30 % 246 376 73
Entity #2 | Chains: C,D
Inhibitor OM00-3 protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures