Sequence Similarity Clusters for the Entities in PDB 1M46

Entity #1 | Chains: A
Myosin light chain protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 22626
95 % 3 3 20245 Flexibility: Medium
Max RMSD: 13.1, Avg RMSD: 7.9
PDBFlex
90 % 3 3 19665
70 % 3 3 18052
50 % 3 3 15681
40 % 85 361 40
30 % 106 432 43
Entity #2 | Chains: B
IQ4 Motif from MYO2P, A Class V Myosin protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60740
95 % 1 1 49539
90 % 1 1 47009
70 % 1 1 41213
50 % 1 1 34966
40 % 1 1 30634
30 % 1 1 25590

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures