Sequence Similarity Clusters for the Entities in PDB 1M46

Entity #1 | Chains: A
Myosin light chain protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 22146
95 % 3 3 19087 Flexibility: Medium
Max RMSD: 13.1, Avg RMSD: 9.2
PDBFlex
90 % 3 3 18583
70 % 3 3 17195
50 % 3 3 14956
40 % 80 336 34
30 % 85 363 47
Entity #2 | Chains: B
IQ4 Motif from MYO2P, A Class V Myosin protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73207
95 % 1 1 51081
90 % 1 1 48497
70 % 1 1 42604
50 % 1 1 36451
40 % 1 1 32183
30 % 1 1 27329

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.