Sequence Similarity Clusters for the Entities in PDB 1M45

Entity #1 | Chains: A
Myosin light chain protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 22457
95 % 1 3 20115 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 2.7
PDBFlex
90 % 1 3 19547
70 % 1 3 17932
50 % 1 3 15577
40 % 22 361 40
30 % 31 432 41
Entity #2 | Chains: B
IQ2 Motif from MYO2P, A Class V Myosin protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63681
95 % 1 1 51721
90 % 1 1 49044
70 % 1 1 42941
50 % 1 1 36430
40 % 1 1 31888
30 % 1 1 26669

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures