Sequence Similarity Clusters for the Entities in PDB 1M43

Entity #1 | Chains: A,B
plasmepsin II protein, length: 331 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 2981
95 % 10 20 1276 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.1
PDBFlex
90 % 10 20 1307
70 % 10 26 990
50 % 10 29 925
40 % 10 29 952
30 % 627 717 29
Entity #2 | Chains: C,D
Pepstatin protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.