Sequence Similarity Clusters for the Entities in PDB 1M3V

Entity #1 | Chains: A
fusion of the LIM interacting domain of ldb1 and the N-terminal LIM domain of LMO4 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62441
95 % 1 1 45857
90 % 1 1 43607
70 % 2 2 23678
50 % 6 6 7339
40 % 6 6 6486
30 % 6 6 5676

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1M3V 1 A fusion of the LIM interacting domain of ldb1 and the N-terminal LIM domain of LMO4 Fusion protein comprises LIM domain transcription factor LMO4 (residues 16-86) via glycine-rich linker (GGSGGHMGSGG), LIM domain-binding protein 1 (residues 300-339). 10090