Sequence Similarity Clusters for the Entities in PDB 1M3U

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J
3-methyl-2-oxobutanoate hydroxymethyltransferase protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 6275
95 % 1 1 6887 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 1 6869
70 % 1 1 6709
50 % 1 5 1416
40 % 1 6 1261
30 % 1 6 1236

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.