Sequence Similarity Clusters for the Entities in PDB 1M3S

Entity #1 | Chains: A,B
Hypothetical protein yckf protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43186
95 % 1 2 19166 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 1 2 18664
70 % 1 2 17248
50 % 1 2 14968
40 % 1 2 13318
30 % 2 4 5878

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures