Sequence Similarity Clusters for the Entities in PDB 1M3J

Entity #1 | Chains: A,B
perfringolysin o protein, length: 471 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 10070
95 % 4 7 5362 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.6
PDBFlex
90 % 4 7 5384
70 % 4 8 4527
50 % 4 8 4352
40 % 13 20 2009
30 % 13 20 1943

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.