Sequence Similarity Clusters for the Entities in PDB 1M35

Entity #1 | Chains: A,B,C,D,E,F
AMINOPEPTIDASE P protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 15 1392
95 % 22 26 1274 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 22 26 1300
70 % 23 27 1264
50 % 23 27 1325
40 % 24 28 1221
30 % 44 49 604

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures