Sequence Similarity Clusters for the Entities in PDB 1M34

Entity #1 | Chains: A,C,I,K
Nitrogenase Molybdenum-Iron Protein alpha chain protein, length: 491 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 15 833
95 % 16 24 779
90 % 16 24 811
70 % 21 30 657
50 % 21 30 703
40 % 21 30 739
30 % 21 31 687
Entity #2 | Chains: B,D,J,L
Nitrogenase Molybdenum-Iron Protein beta chain protein, length: 522 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 22 694
95 % 16 24 778
90 % 16 24 810
70 % 16 24 850
50 % 21 30 700
40 % 21 30 737
30 % 21 30 730
Entity #3 | Chains: E,F,G,H,M,N,O,P
Nitrogenase Iron Protein 1 protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 12 708
95 % 4 21 604
90 % 4 21 635
70 % 4 21 670
50 % 5 22 688
40 % 5 22 729
30 % 5 22 723

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.