Sequence Similarity Clusters for the Entities in PDB 1M2Z

Entity #1 | Chains: A,D
glucocorticoid receptor protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38796
95 % 21 24 1223 Flexibility: Medium
Max RMSD: 16.7, Avg RMSD: 6.1
PDBFlex
90 % 21 24 1248
70 % 49 53 537
50 % 156 167 201
40 % 156 167 221
30 % 156 167 229
Entity #2 | Chains: B,E
nuclear receptor coactivator 2 protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 25193
95 % 2 2 21476 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.8
PDBFlex
90 % 2 2 20861
70 % 2 2 19152
50 % 2 2 16648
40 % 2 2 14860
30 % 2 2 12749

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures