Sequence Similarity Clusters for the Entities in PDB 1M2Z

Entity #1 | Chains: A,D
glucocorticoid receptor protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37114
95 % 18 21 1328 Flexibility: Medium
Max RMSD: 16.7, Avg RMSD: 5.6
PDBFlex
90 % 18 21 1350
70 % 46 50 507
50 % 153 164 197
40 % 153 164 213
30 % 153 164 222
Entity #2 | Chains: B,E
nuclear receptor coactivator 2 protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 24017
95 % 2 2 20492 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.8
PDBFlex
90 % 2 2 19926
70 % 2 2 18355
50 % 2 2 15984
40 % 2 2 14279
30 % 2 2 12248

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.