Sequence Similarity Clusters for the Entities in PDB 1M2Z

Entity #1 | Chains: A,D
glucocorticoid receptor protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38232
95 % 20 23 1282 Flexibility: Medium
Max RMSD: 16.7, Avg RMSD: 6.1
PDBFlex
90 % 20 23 1312
70 % 48 52 515
50 % 155 166 199
40 % 155 166 217
30 % 155 166 225
Entity #2 | Chains: B,E
nuclear receptor coactivator 2 protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 24792
95 % 2 2 21160 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.8
PDBFlex
90 % 2 2 20573
70 % 2 2 18869
50 % 2 2 16414
40 % 2 2 14660
30 % 2 2 12575

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.