Sequence Similarity Clusters for the Entities in PDB 1M2V

Entity #1 | Chains: A
protein transport protein SEC23 protein, length: 768 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 9918
95 % 3 4 9989
90 % 3 4 9877
70 % 3 4 9390
50 % 3 4 8493
40 % 14 26 1895
30 % 14 26 1836
Entity #2 | Chains: B
protein transport protein SEC24 protein, length: 926 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 16170
95 % 1 3 9980
90 % 1 3 9868
70 % 1 3 9381
50 % 1 3 8484
40 % 1 3 7776
30 % 1 3 6875

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.