Sequence Similarity Clusters for the Entities in PDB 1M2V

Entity #1 | Chains: A
protein transport protein SEC23 protein, length: 768 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 9459
95 % 3 4 9512
90 % 3 4 9399
70 % 3 4 8944
50 % 3 4 8120
40 % 8 15 2939
30 % 8 15 2751
Entity #2 | Chains: B
protein transport protein SEC24 protein, length: 926 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 15381
95 % 1 3 9500
90 % 1 3 9388
70 % 1 3 8934
50 % 1 3 8109
40 % 1 3 7438
30 % 1 3 6576

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.