Sequence Similarity Clusters for the Entities in PDB 1M2V

Entity #1 | Chains: A
protein transport protein SEC23 protein, length: 768 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 9243
95 % 3 4 9289
90 % 3 4 9187
70 % 3 4 8745
50 % 3 4 7945
40 % 8 15 2872
30 % 8 15 2697
Entity #2 | Chains: B
protein transport protein SEC24 protein, length: 926 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 14996
95 % 1 3 9279
90 % 1 3 9178
70 % 1 3 8736
50 % 1 3 7935
40 % 1 3 7284
30 % 1 3 6445

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.