Sequence Similarity Clusters for the Entities in PDB 1M2T

Entity #1 | Chains: A
mistletoe lectin I A chain protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 38059
95 % 1 3 22483 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 2 12 5669
70 % 2 17 3698
50 % 2 17 3604
40 % 24 77 623
30 % 112 208 213
Entity #2 | Chains: B
mistletoe lectin I B chain protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 37658
95 % 2 12 5630 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 2 17 3744
70 % 2 17 3695
50 % 2 25 2183
40 % 13 47 1159
30 % 13 47 1136

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.