Sequence Similarity Clusters for the Entities in PDB 1M2T

Entity #1 | Chains: A
mistletoe lectin I A chain protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 29039
95 % 1 3 25375 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 2 13 5450
70 % 2 18 3643
50 % 2 18 3566
40 % 87 170 282
30 % 113 212 231
Entity #2 | Chains: B
mistletoe lectin I B chain protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40320
95 % 2 13 5421 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 2 18 3699
70 % 2 18 3748
50 % 2 26 2258
40 % 13 48 1190
30 % 13 48 1181

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures