Sequence Similarity Clusters for the Entities in PDB 1M2O

Entity #1 | Chains: A,C
protein transport protein SEC23 protein, length: 768 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 9309
95 % 2 4 9360
90 % 2 4 9260
70 % 2 4 8808
50 % 2 4 8007
40 % 5 15 2889
30 % 5 15 2715
Entity #2 | Chains: B,D
GTP-binding protein SAR1 protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 14390
95 % 1 2 13543
90 % 1 2 13293
70 % 1 2 12469
50 % 6 7 4206
40 % 6 7 4018
30 % 533 728 15

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.