Sequence Similarity Clusters for the Entities in PDB 1M2J

Entity #1 | Chains: A
Silent Information Regulator 2 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 66587
95 % 2 7 8089 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 2 7 8015
70 % 2 7 7725
50 % 2 7 7287
40 % 10 54 618
30 % 21 126 248

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures