Sequence Similarity Clusters for the Entities in PDB 1M2D

Entity #1 | Chains: A,B
[2Fe-2S] ferredoxin protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48029
95 % 1 4 10168 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 1 4 10043
70 % 1 4 9541
50 % 1 4 8630
40 % 1 4 7908
30 % 1 4 6968

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures