Sequence Similarity Clusters for the Entities in PDB 1M2D

Entity #1 | Chains: A,B
[2Fe-2S] ferredoxin protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46145
95 % 1 4 9743 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 1 4 9634
70 % 1 4 9181
50 % 1 4 8298
40 % 1 4 7606
30 % 1 4 6712

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.