Sequence Similarity Clusters for the Entities in PDB 1M2A

Entity #1 | Chains: A,B
[2Fe-2S] ferredoxin protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 24095
95 % 3 4 9948 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 3 4 9826
70 % 3 4 9348
50 % 3 4 8460
40 % 3 4 7754
30 % 3 4 6834

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures