Sequence Similarity Clusters for the Entities in PDB 1M27

Entity #1 | Chains: A
SH2 domain protein 1A protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 8919
95 % 4 4 9007
90 % 4 4 8905
70 % 4 4 8479
50 % 4 4 7699
40 % 106 129 206
30 % 140 216 151
Entity #2 | Chains: B
Signaling lymphocytic activation molecule protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
Proto-oncogene tyrosine-protein kinase FYN protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 13 2108
95 % 7 15 2152
90 % 7 15 2208
70 % 27 45 724
50 % 31 61 532
40 % 119 272 117
30 % 417 902 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.