Sequence Similarity Clusters for the Entities in PDB 1M27

Entity #1 | Chains: A
SH2 domain protein 1A protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 9233
95 % 4 4 9310
90 % 4 4 9201
70 % 4 4 8769
50 % 4 4 7951
40 % 110 134 216
30 % 149 226 150
Entity #2 | Chains: B
Signaling lymphocytic activation molecule protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
Proto-oncogene tyrosine-protein kinase FYN protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 13 2194
95 % 7 15 2233
90 % 7 15 2299
70 % 27 45 795
50 % 31 61 563
40 % 126 279 119
30 % 438 932 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.