Sequence Similarity Clusters for the Entities in PDB 1M21

Entity #1 | Chains: A,B
Peptide Amidase protein, length: 503 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 16652
95 % 3 3 13381 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 3 3 13166
70 % 3 3 12358
50 % 3 3 11036
40 % 3 3 10021
30 % 8 32 752
Entity #2 | Chains: C,D
CHYMOSTATIN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.