Sequence Similarity Clusters for the Entities in PDB 1M21

Entity #1 | Chains: A,B
Peptide Amidase protein, length: 503 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 17765
95 % 3 3 14203 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 3 3 13974
70 % 3 3 13123
50 % 3 3 11700
40 % 3 3 10606
30 % 9 34 753
Entity #2 | Chains: C,D
CHYMOSTATIN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures