Sequence Similarity Clusters for the Entities in PDB 1M1Y

Entity #1 | Chains: A,C,I,K
Nitrogenase molybdenum-iron protein alpha chain protein, length: 491 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 15 833
95 % 24 24 772
90 % 24 24 804
70 % 30 30 651
50 % 30 30 698
40 % 30 30 735
30 % 31 31 687
Entity #2 | Chains: B,D,J,L
Nitrogenase molybdenum-iron protein beta chain protein, length: 522 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 22 22 692
95 % 24 24 771
90 % 24 24 803
70 % 24 24 843
50 % 30 30 695
40 % 30 30 733
30 % 30 30 729
Entity #3 | Chains: E,F,G,H,M,N,O,P
nitrogenase IRON protein 1 protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 12 706
95 % 21 21 598
90 % 21 21 631
70 % 21 21 663
50 % 22 22 683
40 % 22 22 724
30 % 22 22 721

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.