Sequence Similarity Clusters for the Entities in PDB 1M1Y

Entity #1 | Chains: A,C,I,K
Nitrogenase molybdenum-iron protein alpha chain protein, length: 491 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 15 811
95 % 24 24 741
90 % 24 24 775
70 % 30 30 636
50 % 30 30 682
40 % 30 30 719
30 % 31 31 682
Entity #2 | Chains: B,D,J,L
Nitrogenase molybdenum-iron protein beta chain protein, length: 522 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 22 22 668
95 % 24 24 740
90 % 24 24 774
70 % 24 24 817
50 % 30 30 680
40 % 30 30 718
30 % 30 30 719
Entity #3 | Chains: E,F,G,H,M,N,O,P
nitrogenase IRON protein 1 protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 12 683
95 % 21 21 587
90 % 21 21 617
70 % 21 21 647
50 % 22 22 668
40 % 22 22 709
30 % 22 22 710

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.