Sequence Similarity Clusters for the Entities in PDB 1M1Y

Entity #1 | Chains: A,C,I,K
Nitrogenase molybdenum-iron protein alpha chain protein, length: 491 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 16 818
95 % 25 25 774
90 % 25 25 801
70 % 31 31 675
50 % 31 31 729
40 % 31 31 760
30 % 33 33 681
Entity #2 | Chains: B,D,J,L
Nitrogenase molybdenum-iron protein beta chain protein, length: 522 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 23 689
95 % 25 25 773
90 % 25 25 800
70 % 25 25 843
50 % 31 31 727
40 % 31 31 759
30 % 31 31 751
Entity #3 | Chains: E,F,G,H,M,N,O,P
nitrogenase IRON protein 1 protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 12 736
95 % 21 21 645
90 % 21 21 671
70 % 21 21 714
50 % 22 22 737
40 % 22 22 774
30 % 22 22 768

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.