Sequence Similarity Clusters for the Entities in PDB 1M1U

Entity #1 | Chains: A
Integrin alpha-M protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 12 2382
95 % 6 13 2905 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.5
PDBFlex
90 % 6 13 2943
70 % 6 13 2913
50 % 7 14 2749
40 % 7 14 2700
30 % 35 58 483

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures