Sequence Similarity Clusters for the Entities in PDB 1M1N

Entity #1 | Chains: A,C,E,G
Nitrogenase molybdenum-iron protein alpha chain protein, length: 491 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 16 821
95 % 2 25 774 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 2 25 801
70 % 2 31 677
50 % 2 31 729
40 % 2 31 761
30 % 2 33 683
Entity #2 | Chains: B,D,F,H
Nitrogenase molybdenum-iron protein beta chain protein, length: 522 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 23 691
95 % 2 25 773 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 2 25 800
70 % 2 25 845
50 % 2 31 727
40 % 2 31 760
30 % 2 31 751

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.