Sequence Similarity Clusters for the Entities in PDB 1M1N

Entity #1 | Chains: A,C,E,G
Nitrogenase molybdenum-iron protein alpha chain protein, length: 491 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 16 840
95 % 2 25 783 Flexibility: No
Max RMSD: 2.6, Avg RMSD: 0.4
PDBFlex
90 % 2 25 812
70 % 2 31 685
50 % 2 31 738
40 % 2 31 771
30 % 2 33 687
Entity #2 | Chains: B,D,F,H
Nitrogenase molybdenum-iron protein beta chain protein, length: 522 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 23 703
95 % 2 25 782 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 2 25 811
70 % 2 25 853
50 % 2 31 736
40 % 2 31 770
30 % 2 31 760

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.