Sequence Similarity Clusters for the Entities in PDB 1M1E

Entity #1 | Chains: A
Beta-catenin protein, length: 538 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 24 1274
95 % 6 24 1724 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.4
PDBFlex
90 % 6 24 1766
70 % 6 25 1643
50 % 6 25 1691
40 % 6 25 1704
30 % 7 28 1435
Entity #2 | Chains: B
ICAT protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73582
95 % 1 1 50853
90 % 1 2 35304
70 % 1 2 31351
50 % 1 2 26765
40 % 1 2 23611
30 % 1 2 19990

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures