Sequence Similarity Clusters for the Entities in PDB 1M1E

Entity #1 | Chains: A
Beta-catenin protein, length: 538 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 24 1241
95 % 6 24 1661 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.4
PDBFlex
90 % 6 24 1702
70 % 6 25 1599
50 % 6 25 1643
40 % 6 25 1663
30 % 7 28 1400
Entity #2 | Chains: B
ICAT protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72191
95 % 1 1 49941
90 % 1 2 34670
70 % 1 2 30804
50 % 1 2 26334
40 % 1 2 23225
30 % 1 2 19678

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures