Sequence Similarity Clusters for the Entities in PDB 1M1D

Entity #1 | Chains: A,C
TGCN5 HISTONE ACETYL TRANSFERASE protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 9 6192
95 % 7 9 6754
90 % 7 9 6732
70 % 7 9 6536
50 % 12 14 3503
40 % 12 14 3386
30 % 12 14 3167
Entity #2 | Chains: B,D
HISTONE H3 protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 15 1634
95 % 17 34 847
90 % 17 34 879
70 % 17 34 911
50 % 17 34 961
40 % 17 34 977
30 % 17 34 957

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.