Sequence Similarity Clusters for the Entities in PDB 1M1D

Entity #1 | Chains: A,C
TGCN5 HISTONE ACETYL TRANSFERASE protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 9 6117
95 % 7 9 6680
90 % 7 9 6661
70 % 7 9 6477
50 % 12 14 3471
40 % 12 14 3356
30 % 12 14 3145
Entity #2 | Chains: B,D
HISTONE H3 protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 15 1623
95 % 17 31 909
90 % 17 31 942
70 % 17 31 968
50 % 17 31 1010
40 % 17 31 1024
30 % 17 31 1003

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.