Blast this sequence against all of PDB Archive.
In each cluster, the chains are sorted (i.e. ranked) according to the following criteria (in this order):
1/resolution - R-value
This ranking has the following implications:
The internal number of the sequence cluster used for unique identification.
The identification of similar sequences in this report is based on clustering as described here.
The PDBFlex database explores the intrinsic flexibility of protein structures by analyzing structural variations of the same protein across the archive. This allows for the easy identification of regions and types of structural flexibility present in a protein of interest. Structures of protein chains with identical sequences (sequence identity > 95%) are aligned, superimposed and clustered.
In the table for each entity, view a list of similar sequences by selecting the link associated with
the percentage cutoff.
View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.
You can also use the structure comparison tool to compare any 2 given structures
Chains in cluster: 101 | Cluster ID:143
RCSB PDB (citation) is managed by two members of the Research Collaboratory for Structural Bioinformatics: Rutgers and UCSD/SDSC
RCSB PDB is a member of the
The RCSB PDB is funded by a grant (DBI-1338415) from the
National Science Foundation, the
National Institutes of Health, and the
US Department of Energy.