Sequence Similarity Clusters for the Entities in PDB 1M10

Entity #1 | Chains: A
von Willebrand Factor protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 25063
95 % 14 14 3664 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.0
PDBFlex
90 % 14 14 3737
70 % 15 15 3456
50 % 15 15 3376
40 % 15 15 3258
30 % 15 15 3017
Entity #2 | Chains: B
Glycoprotein Ib alpha protein, length: 290 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 8490
95 % 13 13 3471 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 1.4
PDBFlex
90 % 13 13 3538
70 % 13 13 3411
50 % 13 13 3324
40 % 13 13 3209
30 % 100 112 251

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures