Sequence Similarity Clusters for the Entities in PDB 1M10

Entity #1 | Chains: A
von Willebrand Factor protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59077
95 % 14 14 3421 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.0
PDBFlex
90 % 14 14 3473
70 % 15 15 3190
50 % 15 15 3114
40 % 15 15 3038
30 % 15 15 2846
Entity #2 | Chains: B
Glycoprotein Ib alpha protein, length: 290 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54623
95 % 13 13 3154
90 % 13 13 3197
70 % 13 13 3174
50 % 13 13 3093
40 % 13 13 3020
30 % 13 13 2824

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.